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Porin (2POR)

Abstract – The crystal structure of porin from Rhodobacter capsulatus has been refined using the simulated annealing method. The final model consists of all 301 amino acid residues well obeying standard geometry, three calcium ions, 274 solvent molecules, three detergent molecules and one unknown ligand modeled as a detergent molecule. The final crystallographic R-factor is 18.6% based on 42,851 independent reflections in the resolution range 10 to 1.8 A.

How to use

In the Confluence editor, type /3d and select 3D Molecule (PDF, SDF or MOL).

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The macro properties panel will appear.

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Choose from either a PDB ID or an Attachment Filename. The attachment filename must be for an attachment on the same page.

Add your macro width and height, or leave for the default size.

Save the Confluence page and the 3D Molecule will be rendered.

Examples

2POR (Porin)

Macro parameters:

PDB ID: 2POR

Macro output:

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1YCR

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(MDM2 bound to the transactivation domain of P53)

Macro parameters:

PDB ID: 2POR

Macro output:

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6WW2 (Structure of human Frizzled5 by fiducial-assisted cryo-EM)

Macro parameters:

PDB ID: 6WW2

Macro output:

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